STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000002508annotation not available (105 aa)    
Predicted Functional Partners:
GOLT1B
Golgi transport 1B.
   
 
 0.725
GOLT1A
Golgi transport 1A.
   
 
 0.725
YKT6
YKT6 v-SNARE homolog.
    
 
 0.697
ENSAHAP00000019553
annotation not available
    
   0.566
COG6
Component of oligomeric golgi complex 6.
    
   0.566
GOSR1
Golgi SNAP receptor complex member 1.
   
 
 0.555
ENSAHAP00000017578
annotation not available
    
   0.533
P4HA1
Prolyl 4-hydroxylase subunit alpha 1.
      
 0.523
MAL2
Mal, T cell differentiation protein 2 (gene/pseudogene).
      
 0.522
FBXO11
F-box protein 11.
      
 0.487
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.