STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1A2Solute carrier organic anion transporter family member 1A2. (654 aa)    
Predicted Functional Partners:
RECQL
RecQ like helicase.
      
 0.655
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
      
 0.608
SLC16A2
Solute carrier family 16 member 2.
   
 0.545
SLC16A10
Solute carrier family 16 member 10.
   
 0.545
EFCAB9
EF-hand calcium binding domain 9.
    
 0.529
ENSAHAP00000010087
annotation not available
    
  0.521
ENSAHAP00000005173
annotation not available
    
 0.517
CATSPER2
Cation channel sperm associated 2.
    
  0.516
CATSPER3
Cation channel sperm associated 3.
    
  0.516
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
    
  0.516
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.