STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO1A2Solute carrier organic anion transporter family member 1A2. (654 aa)    
Predicted Functional Partners:
RECQL
RecQ like helicase.
      
 0.516
ENSAHAP00000010087
annotation not available
    
  0.507
EFCAB9
EF-hand calcium binding domain 9.
   
 0.474
ENSAHAP00000005173
annotation not available
    
  0.456
CATSPER2
Cation channel sperm associated 2.
    
  0.456
CATSPER3
Cation channel sperm associated 3.
    
  0.456
CATSPERG
Cation channel sperm associated auxiliary subunit gamma.
    
  0.445
SLC16A2
Solute carrier family 16 member 2.
   
 
 0.441
SLC16A10
Solute carrier family 16 member 10.
   
 
 0.441
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
      
 0.440
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.