STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAF5TATA-box binding protein associated factor 5. (721 aa)    
Predicted Functional Partners:
TAF12
TATA-box binding protein associated factor 12.
   
 0.999
ENSAHAP00000025728
annotation not available
    
 0.999
TAF7
TATA-box binding protein associated factor 7.
    
 0.998
TAF13
TATA-box binding protein associated factor 13.
    
 0.998
TAF9
TATA-box binding protein associated factor 9.
    
 0.998
TAF3
TATA-box binding protein associated factor 3.
    
 0.998
ENSAHAP00000022740
annotation not available
   
 0.998
TAF8
TATA-box binding protein associated factor 8.
    
 0.998
TAF2
TATA-box binding protein associated factor 2.
    
 0.997
SUPT20H
SPT20 homolog, SAGA complex component.
    
 0.997
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.