STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRDE2NRDE-2, necessary for RNA interference, domain containing. (1095 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
    
 
 0.959
PLK3
Polo like kinase 3.
    
 0.924
ENSAHAP00000017356
annotation not available
    
 0.924
PLK2
Polo like kinase 2.
    
 0.924
PLK4
Polo like kinase 4.
    
 0.887
TBC1D2
TBC1 domain family member 2.
    
 0.825
TBC1D30
TBC1 domain family member 30.
    
 0.825
TBC1D2B
TBC1 domain family member 2B.
    
 0.825
C15orf65
Chromosome 15 open reading frame 65.
    
 0.825
C9orf116
Chromosome 9 open reading frame 116.
    
 0.825
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.