Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPZA3Capping actin protein of muscle Z-line subunit alpha 3. (260 aa)    
Predicted Functional Partners:
CAPZB
Capping actin protein of muscle Z-line subunit beta.
   
 0.996
CAPZA1
Capping actin protein of muscle Z-line subunit alpha 1.
   
  0.991
S100B
S100 calcium binding protein B.
    
  0.948
DCTN2
Dynactin subunit 2.
   
 0.945
DCTN4
Dynactin subunit 4.
   
 0.944
WASHC4
WASH complex subunit 4.
   
 0.943
WASHC5
WASH complex subunit 5.
    
 0.942
DCTN5
Dynactin subunit 5.
   
 0.941
DCTN6
Dynactin subunit 6.
   
 0.936
WASHC1
WASH complex subunit 1.
    
  0.927
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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