STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TEX264Testis expressed 264, ER-phagy receptor. (336 aa)    
Predicted Functional Partners:
CCPG1
Cell cycle progression 1.
     
 0.891
TMEM79
Transmembrane protein 79.
    
   0.828
SEC62
SEC62 homolog, preprotein translocation factor.
      
 0.676
RETREG1
Reticulophagy regulator 1.
      
 0.618
MED20
Mediator complex subunit 20.
      
 0.605
NEK9
NIMA related kinase 9.
      
 0.592
SLC44A3
Solute carrier family 44 member 3.
      
 0.584
ENSAHAP00000004784
annotation not available
      
 0.571
TAX1BP1
Tax1 binding protein 1.
      
 0.544
F5
Coagulation factor V.
     
  0.517
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.