Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000003263annotation not available (333 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
   
 0.968
ARID4A
AT-rich interaction domain 4A.
   
 0.968
RCOR1
REST corepressor 1.
    
 0.963
RB1
RB transcriptional corepressor 1.
   
 0.953
SIN3A
SIN3 transcription regulator family member A.
   
 0.951
EED
Embryonic ectoderm development.
   
 0.947
ENSAHAP00000001825
annotation not available
   
 0.944
HDAC3
Histone deacetylase 3.
   
 0.940
PHF12
PHD finger protein 12.
   
 0.938
SIN3B
SIN3 transcription regulator family member B.
   
 0.937
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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