STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPG21SPG21 abhydrolase domain containing, maspardin. (310 aa)    
Predicted Functional Partners:
ATPAF2
ATP synthase mitochondrial F1 complex assembly factor 2.
   
   0.910
VAMP7
Vesicle associated membrane protein 7.
    
   0.872
AKIRIN2
Akirin 2.
    
   0.749
SPG11
SPG11 vesicle trafficking associated, spatacsin.
      
 0.713
SHCBP1
SHC binding and spindle associated 1.
      
 0.696
ENSAHAP00000000311
annotation not available
      
 0.693
ENSAHAP00000016334
annotation not available
      
 0.688
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
      
 0.682
SPART
Spartin.
      
 0.644
PAAF1
Proteasomal ATPase associated factor 1.
      
 0.640
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.