STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CXCR4C-X-C motif chemokine receptor 4. (365 aa)    
Predicted Functional Partners:
CXCL12
C-X-C motif chemokine ligand 12.
    
 0.999
ACKR3
Atypical chemokine receptor 3.
    
 0.997
ARRB1
Arrestin beta 1.
    
 0.967
ENSAHAP00000006026
annotation not available
   
 0.964
ITCH
Itchy E3 ubiquitin protein ligase.
    
 
 0.961
ENSAHAP00000007030
annotation not available
    
 0.959
ARR3
Arrestin 3.
    
 0.959
ENSAHAP00000007008
annotation not available
    
 0.954
ENSAHAP00000017259
annotation not available
    
 0.953
ENSAHAP00000018382
annotation not available
     
 0.946
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.