STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BLOC1S2Biogenesis of lysosomal organelles complex 1 subunit 2. (141 aa)    
Predicted Functional Partners:
BLOC1S6
Biogenesis of lysosomal organelles complex 1 subunit 6.
    
 0.999
SNAPIN
SNAP associated protein.
   
 0.999
ENSAHAP00000011679
annotation not available
   
 0.999
ENSAHAP00000023425
annotation not available
    
 0.999
KXD1
KxDL motif containing 1.
    
 0.999
ENSAHAP00000002413
annotation not available
   
 0.998
ENSAHAP00000015545
annotation not available
   
 0.998
BORCS6
BLOC-1 related complex subunit 6.
    
 0.998
BORCS5
BLOC-1 related complex subunit 5.
   
 0.997
BCAS4
Breast carcinoma amplified sequence 4.
    
  0.991
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.