STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DHX29DExH-box helicase 29. (1300 aa)    
Predicted Functional Partners:
EIF3B
Eukaryotic translation initiation factor 3 subunit B.
   
 0.986
RPS14
Ribosomal protein S14.
   
  0.982
RPS6
Ribosomal protein S6.
    
  0.982
RPS3A
Ribosomal protein S3A.
    
  0.982
ENSAHAP00000018586
annotation not available
   
  0.982
RPS26
Ribosomal protein S26.
   
 0.982
RPS25
Ribosomal protein S25.
    
  0.981
RPS28
Ribosomal protein S28.
    
  0.981
ENSAHAP00000001079
annotation not available
    
 0.980
RPS21
Ribosomal protein S21.
    
  0.980
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.