ENSAHAP00000003733 protein (Apteryx haastii)

Nodes:

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Knowledge-based Evidence

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textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-expression

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[Homology]

Score

ENSAHAP00000003733

annotation not available (163 aa)

Predicted Functional Partners:

ENSAHAP00000023106

0.754

ENSAHAP00000009624

0.690

ENSAHAP00000003629

0.667

ENSAHAP00000003651

0.664

ENSAHAP00000003741

0.664

ENSAHAP00000004454

0.651

ENSAHAP00000010214

0.651

ENSAHAP00000023525

0.648

SYK

0.625

ENSAHAP00000005098

0.625

Your Current Organism:

Apteryx haastii

NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi

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TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSAHAP00000003629	ENSAHAP00000003733	ENSAHAP00000003629	ENSAHAP00000003733	annotation not available	annotation not available	0.667
ENSAHAP00000003629	ENSAHAP00000004454	ENSAHAP00000003629	ENSAHAP00000004454	annotation not available	annotation not available	0.630
ENSAHAP00000003629	ENSAHAP00000005098	ENSAHAP00000003629	ENSAHAP00000005098	annotation not available	annotation not available	0.522
ENSAHAP00000003629	ENSAHAP00000009624	ENSAHAP00000003629	ENSAHAP00000009624	annotation not available	annotation not available	0.573
ENSAHAP00000003629	ENSAHAP00000010214	ENSAHAP00000003629	ENSAHAP00000010214	annotation not available	annotation not available	0.672
ENSAHAP00000003629	ENSAHAP00000023106	ENSAHAP00000003629	ENSAHAP00000023106	annotation not available	annotation not available	0.754
ENSAHAP00000003629	ENSAHAP00000023525	ENSAHAP00000003629	ENSAHAP00000023525	annotation not available	annotation not available	0.664
ENSAHAP00000003629	SYK	ENSAHAP00000003629	ENSAHAP00000001624	annotation not available	Spleen associated tyrosine kinase.	0.528
ENSAHAP00000003651	ENSAHAP00000003733	ENSAHAP00000003651	ENSAHAP00000003733	annotation not available	annotation not available	0.664
ENSAHAP00000003651	ENSAHAP00000005098	ENSAHAP00000003651	ENSAHAP00000005098	annotation not available	annotation not available	0.522
ENSAHAP00000003651	ENSAHAP00000009624	ENSAHAP00000003651	ENSAHAP00000009624	annotation not available	annotation not available	0.573
ENSAHAP00000003651	ENSAHAP00000023106	ENSAHAP00000003651	ENSAHAP00000023106	annotation not available	annotation not available	0.754
ENSAHAP00000003651	SYK	ENSAHAP00000003651	ENSAHAP00000001624	annotation not available	Spleen associated tyrosine kinase.	0.528
ENSAHAP00000003733	ENSAHAP00000003629	ENSAHAP00000003733	ENSAHAP00000003629	annotation not available	annotation not available	0.667
ENSAHAP00000003733	ENSAHAP00000003651	ENSAHAP00000003733	ENSAHAP00000003651	annotation not available	annotation not available	0.664
ENSAHAP00000003733	ENSAHAP00000003741	ENSAHAP00000003733	ENSAHAP00000003741	annotation not available	annotation not available	0.664
ENSAHAP00000003733	ENSAHAP00000004454	ENSAHAP00000003733	ENSAHAP00000004454	annotation not available	annotation not available	0.651
ENSAHAP00000003733	ENSAHAP00000005098	ENSAHAP00000003733	ENSAHAP00000005098	annotation not available	annotation not available	0.625
ENSAHAP00000003733	ENSAHAP00000009624	ENSAHAP00000003733	ENSAHAP00000009624	annotation not available	annotation not available	0.690
ENSAHAP00000003733	ENSAHAP00000010214	ENSAHAP00000003733	ENSAHAP00000010214	annotation not available	annotation not available	0.651