Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNDP1Carnosine dipeptidase 1. (480 aa)    
Predicted Functional Partners:
CNDP2
Carnosine dipeptidase 2.
   
  0.970
ENSAHAP00000003225
annotation not available
   
 
 0.938
CARNMT1
Carnosine N-methyltransferase 1.
     
 0.928
AGMAT
Agmatinase.
  
 
 0.924
ALDH9A1
Aldehyde dehydrogenase 9 family member A1.
  
 
 0.920
HAL
Histidine ammonia-lyase.
    
 0.919
GADL1
Glutamate decarboxylase like 1.
    
 0.918
ENSAHAP00000025830
annotation not available
  
 
 0.908
ABAT
4-aminobutyrate aminotransferase.
   
 0.906
GATM
Glycine amidinotransferase.
  
 0.905
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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