STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR3A5-hydroxytryptamine receptor 3A. (403 aa)    
Predicted Functional Partners:
GRIK4
Glutamate ionotropic receptor kainate type subunit 4.
    
 0.774
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
     
 0.768
GRIN2A
Glutamate ionotropic receptor NMDA type subunit 2A.
     
 0.759
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
     
 0.757
GRIN1
Glutamate ionotropic receptor NMDA type subunit 1.
   
 
 0.755
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
     
 0.755
CACNG3
Calcium voltage-gated channel auxiliary subunit gamma 3.
   
 
  0.752
GRIN2B
Glutamate ionotropic receptor NMDA type subunit 2B.
     
 0.750
ABHD12
Abhydrolase domain containing 12.
    
  0.748
GRIN3B
Glutamate ionotropic receptor NMDA type subunit 3B.
     
 0.735
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.