STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000004232annotation not available (202 aa)    
Predicted Functional Partners:
ENSAHAP00000011812
annotation not available
   
 
 0.949
COLEC11
Collectin subfamily member 11.
     
  0.885
COLEC12
Collectin subfamily member 12.
   
  0.850
COLEC10
Collectin subfamily member 10.
     
 0.793
ENSAHAP00000004225
annotation not available
     
  0.779
ENSAHAP00000023106
annotation not available
    
  0.754
CKAP4
Cytoskeleton associated protein 4.
    
 0.644
ENSAHAP00000007174
annotation not available
    
  0.591
ENSAHAP00000017015
annotation not available
    
  0.591
TNR
Tenascin R.
    
  0.591
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.