Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000004243annotation not available (1325 aa)    
Predicted Functional Partners:
ENSAHAP00000004206
annotation not available
 
 
0.984
FREM2
FRAS1 related extracellular matrix 2.
   
 0.922
ENSAHAP00000005998
annotation not available
   
 0.918
ITGA8
Integrin subunit alpha 8.
   
 
 0.902
ITGB1
Integrin subunit beta 1.
    
 0.902
NPNT
Nephronectin.
    
 0.901
FREM3
FRAS1 related extracellular matrix 3.
   
 0.883
ITGB2
Integrin subunit beta 2.
    
 0.853
ENSAHAP00000028281
annotation not available
   
 
 0.853
ITGAV
Integrin subunit alpha V.
   
 
 0.831
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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