STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000004366annotation not available (79 aa)    
Predicted Functional Partners:
C4orf47
Chromosome 4 open reading frame 47.
   
 
 0.856
ENSAHAP00000017278
annotation not available
    
  0.760
DRC3
Dynein regulatory complex subunit 3.
   
  0.758
CATIP
Ciliogenesis associated TTC17 interacting protein.
   
  0.737
CFAP45
Cilia and flagella associated protein 45.
   
   0.733
PPIL6
Peptidylprolyl isomerase like 6.
   
   0.727
ENSAHAP00000008969
annotation not available
   
   0.725
GAS8
Growth arrest specific 8.
    
 
 0.718
PACRG
Parkin coregulated.
    
   0.714
CFAP44
Cilia and flagella associated protein 44.
    
   0.714
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.