STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PMS1PMS1 homolog 1, mismatch repair system component. (935 aa)    
Predicted Functional Partners:
MSH2
mutS homolog 2.
 
 0.999
MSH6
mutS homolog 6.
 
 0.999
MLH1
mutL homolog 1.
   
 0.999
MSH3
mutS homolog 3.
 
 0.998
FAN1
FANCD2 and FANCI associated nuclease 1.
    
 0.994
MSH4
mutS homolog 4.
 
 0.991
PMS2
PMS1 homolog 2, mismatch repair system component.
   
 0.990
MLH3
mutL homolog 3.
   
 0.987
EXO1
Exonuclease 1.
   
 0.959
ENSAHAP00000004211
annotation not available
  
 0.956
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.