STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000004792annotation not available (128 aa)    
Predicted Functional Partners:
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
 0.965
EPAS1
Endothelial PAS domain protein 1.
    
 0.963
NPAS3
Neuronal PAS domain protein 3.
    
 0.900
ENSAHAP00000028018
annotation not available
    
 0.849
ELOC
Elongin C.
     
 0.754
CUL2
Cullin 2.
     
 0.690
PRKCB
Protein kinase C beta.
    
  0.684
PRKCA
Protein kinase C alpha.
    
  0.684
ENSAHAP00000022937
annotation not available
     
 0.681
RBX1
Ring-box 1.
     
 0.637
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.