STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000004810annotation not available (491 aa)    
Predicted Functional Partners:
SAMD12
Sterile alpha motif domain containing 12.
    
 0.896
ENSAHAP00000027592
annotation not available
 
      0.878
RAF1
Raf-1 proto-oncogene, serine/threonine kinase.
    
 0.858
BRAF
B-Raf proto-oncogene, serine/threonine kinase.
    
 0.793
KSR1
Kinase suppressor of ras 1.
    
 0.773
KSR2
Kinase suppressor of ras 2.
    
 0.773
ENSAHAP00000000909
annotation not available
 
      0.756
MAP2K1
Mitogen-activated protein kinase kinase 1.
    
 0.706
MAP2K5
Mitogen-activated protein kinase kinase 5.
    
 0.706
ENSAHAP00000028123
annotation not available
    
 0.706
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.