STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNEP1R1CTD nuclear envelope phosphatase 1 regulatory subunit 1. (107 aa)    
Predicted Functional Partners:
LPIN1
Lipin 1.
     
 0.672
UBLCP1
Ubiquitin like domain containing CTD phosphatase 1.
   
 0.655
CTDSPL2
CTD small phosphatase like 2.
    
 0.649
CTDSPL
CTD small phosphatase like.
    
 0.649
ENSAHAP00000013742
annotation not available
    
 0.649
CTDSP1
CTD small phosphatase 1.
    
 0.649
CTDSP2
CTD small phosphatase 2.
    
 0.649
ENSAHAP00000000009
annotation not available
     
 0.598
LPIN2
Lipin 2.
     
 0.598
MYOM1
Myomesin 1.
     
 0.595
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.