STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC2Zinc finger CCHC-type containing 2. (1122 aa)    
Predicted Functional Partners:
BCLAF3
BCLAF1 and THRAP3 family member 3.
      
 0.870
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 
 0.718
MTREX
Mtr4 exosome RNA helicase.
   
 0.714
DNAJC13
DnaJ heat shock protein family (Hsp40) member C13.
   
  
 0.675
TENT4B
Terminal nucleotidyltransferase 4B.
   
 0.672
TENT4A
Terminal nucleotidyltransferase 4A.
   
 0.655
ENSAHAP00000002757
annotation not available
   
 0.645
ENSAHAP00000024902
annotation not available
   
 
 0.636
FGGY
FGGY carbohydrate kinase domain containing.
    
 
 0.614
ENSAHAP00000027785
annotation not available
      
 0.614
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.