STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A14Solute carrier family 25 member 14. (202 aa)    
Predicted Functional Partners:
SCAMP2
Secretory carrier membrane protein 2.
      
 0.586
SLC25A27
Solute carrier family 25 member 27.
   
 
  0.557
TMLHE
Trimethyllysine hydroxylase, epsilon.
      
 0.511
ALG8
ALG8 alpha-1,3-glucosyltransferase.
      
 0.477
ENSAHAP00000025485
annotation not available
    
 
 0.477
SNIP1
Smad nuclear interacting protein 1.
      
 0.458
LGALS2
Galectin 2.
      
 0.452
PLPP1
Phospholipid phosphatase 1.
      
 0.448
ENSAHAP00000005216
annotation not available
      
 0.439
CHMP5
Charged multivesicular body protein 5.
      
 0.435
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.