STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB1EF-hand calcium binding domain 1. (218 aa)    
Predicted Functional Partners:
TTC25
Tetratricopeptide repeat domain 25.
   
 0.994
ARMC4
Armadillo repeat containing 4.
   
 0.993
ENSAHAP00000026115
annotation not available
    
 0.989
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.988
C4orf47
Chromosome 4 open reading frame 47.
    
 
 0.986
ARMC3
Armadillo repeat containing 3.
   
 0.973
EFHC2
EF-hand domain containing 2.
   
 
 0.958
C5orf49
Chromosome 5 open reading frame 49.
    
 
 0.956
ENSAHAP00000004318
annotation not available
    
 
 0.952
EFHC1
EF-hand domain containing 1.
   
 
 0.926
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.