STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFCAB1EF-hand calcium binding domain 1. (218 aa)    
Predicted Functional Partners:
C9orf116
Chromosome 9 open reading frame 116.
    
 
 0.851
TTC25
Tetratricopeptide repeat domain 25.
    
 0.850
ARMC3
Armadillo repeat containing 3.
   
 0.848
ARMC4
Armadillo repeat containing 4.
   
 0.840
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.825
ENSAHAP00000026115
annotation not available
    
 0.809
EFHC2
EF-hand domain containing 2.
   
 
 0.792
ENSAHAP00000017278
annotation not available
   
 0.783
C19orf71
Chromosome 19 open reading frame 71.
    
 
 0.763
RIBC2
RIB43A domain with coiled-coils 2.
    
 0.751
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.