STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G2E3G2/M-phase specific E3 ubiquitin protein ligase. (722 aa)    
Predicted Functional Partners:
EED
Embryonic ectoderm development.
   
 0.783
ENSAHAP00000022590
annotation not available
   
 0.780
CDYL2
Chromodomain Y like 2.
   
 0.780
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.775
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.766
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.764
ENSAHAP00000004163
annotation not available
  
 0.755
MPHOSPH8
M-phase phosphoprotein 8.
    
 0.728
DPY30
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.719
KDM2B
Lysine demethylase 2B.
    
 0.693
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.