STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EPXEosinophil peroxidase. (693 aa)    
Predicted Functional Partners:
ENSAHAP00000006162
annotation not available
     
  0.893
ENSAHAP00000024266
annotation not available
     
  0.893
ENSAHAP00000024270
annotation not available
     
  0.893
ENSAHAP00000019913
annotation not available
    
 0.864
ENSAHAP00000019921
annotation not available
    
 0.864
ENSAHAP00000024260
annotation not available
     
  0.862
GOT1
Glutamic-oxaloacetic transaminase 1.
    
 0.844
GOT2
Glutamic-oxaloacetic transaminase 2.
    
 0.841
TH
Tyrosine hydroxylase.
     
 0.834
ENSAHAP00000004296
annotation not available
    
  0.809
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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