STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TDRPTestis development related protein. (167 aa)    
Predicted Functional Partners:
FBXO38
F-box protein 38.
      
 0.921
RASSF9
Ras association domain family member 9.
      
 0.587
SMOC1
SPARC related modular calcium binding 1.
      
 0.576
SMOC2
SPARC related modular calcium binding 2.
      
 0.576
SPATA2
Spermatogenesis associated 2.
      
 0.575
EPDR1
Ependymin related 1.
      
 0.574
TERB1
Telomere repeat binding bouquet formation protein 1.
      
 0.564
BRINP2
BMP/retinoic acid inducible neural specific 2.
      
 0.496
ENO4
Enolase 4.
      
 0.477
ENSAHAP00000020466
annotation not available
      
 0.477
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.