Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000006571annotation not available (440 aa)    
Predicted Functional Partners:
CCNG2
Cyclin G2.
    
 
 0.640
FECH
Ferrochelatase.
      
 0.593
FAM214A
Family with sequence similarity 214 member A.
      
 0.574
HNF1B
HNF1 homeobox B.
    
 0.524
ORC3
Origin recognition complex subunit 3.
    
   0.520
ENSAHAP00000004557
annotation not available
    
 0.511
CEBPA
CCAAT enhancer binding protein alpha.
    
 
 0.491
PPEF2
Protein phosphatase with EF-hand domain 2.
   
  
 0.482
PPEF1
Protein phosphatase with EF-hand domain 1.
   
  
 0.482
HNF1A
HNF1 homeobox A.
    
 0.480
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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