STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NIPA2NIPA magnesium transporter 2. (361 aa)    
Predicted Functional Partners:
TUBGCP5
Tubulin gamma complex associated protein 5.
   
  
 0.756
CYFIP1
Cytoplasmic FMR1 interacting protein 1.
   
  
 0.725
MMGT1
Membrane magnesium transporter 1.
      
 0.593
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
      
 0.574
DPM2
Dolichyl-phosphate mannosyltransferase subunit 2, regulatory.
   
 
  0.542
UNC50
Unc-50 inner nuclear membrane RNA binding protein.
 
    
 0.534
DPM3
Dolichyl-phosphate mannosyltransferase subunit 3, regulatory.
     
  0.501
GMDS
GDP-mannose 4,6-dehydratase.
     
  0.501
ENSAHAP00000006079
annotation not available
     
  0.501
GALE
UDP-galactose-4-epimerase.
     
  0.501
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.