STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FXNFrataxin. (136 aa)    
Predicted Functional Partners:
ENSAHAP00000010281
annotation not available
   
 0.999
ISCU
Iron-sulfur cluster assembly enzyme.
    
 0.999
ENSAHAP00000022604
annotation not available
    
 0.998
SCLY
Selenocysteine lyase.
   
 0.986
FECH
Ferrochelatase.
    
 0.971
HEPH
Hephaestin.
     
 0.866
CP
Ceruloplasmin.
     
 0.866
HMOX2
Heme oxygenase 2.
     
 0.824
HMOX1
Heme oxygenase 1.
     
 0.824
MOCOS
Molybdenum cofactor sulfurase.
     
 0.814
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.