STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SOX11SRY-box transcription factor 11. (405 aa)    
Predicted Functional Partners:
GYS2
Glycogen synthase 2.
    
   0.851
TCF7
Transcription factor 7.
    
 0.825
SOX5
SRY-box transcription factor 5.
   
 0.822
CTNNB1
Catenin beta 1.
    
 0.762
SOX13
SRY-box transcription factor 13.
    
 0.743
GYG1
Glycogenin 1.
    
   0.697
GYG2
Glycogenin 2.
    
   0.697
LEF1
Lymphoid enhancer binding factor 1.
    
 0.685
ENSAHAP00000007622
annotation not available
    
 0.674
TCF7L2
Transcription factor 7 like 2.
    
 0.674
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.