Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000007101annotation not available (92 aa)    
Predicted Functional Partners:
FOXP4
Forkhead box P4.
    
 
 0.731
RUNX2
RUNX family transcription factor 2.
    
 0.655
RUNX3
RUNX family transcription factor 3.
    
 0.655
RUNX1
RUNX family transcription factor 1.
    
 0.655
PRDM14
PR/SET domain 14.
    
 0.621
CUX1
Cut like homeobox 1.
    
 
 0.617
SOX5
SRY-box transcription factor 5.
    
 
 0.607
TBR1
T-box brain transcription factor 1.
    
 
 0.601
MED8
Mediator complex subunit 8.
     
 0.581
CBFB
Core-binding factor subunit beta.
    
 0.576
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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