STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HAPLN3Hyaluronan and proteoglycan link protein 3. (322 aa)    
Predicted Functional Partners:
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.814
ARID4B
AT-rich interaction domain 4B.
    
 0.624
ARID4A
AT-rich interaction domain 4A.
    
 0.624
SLF1
SMC5-SMC6 complex localization factor 1.
   
 0.611
WDR90
WD repeat domain 90.
    
 0.591
ENSAHAP00000004206
annotation not available
    
 0.537
ENSAHAP00000004243
annotation not available
    
 0.537
ENSAHAP00000005998
annotation not available
   
 0.529
ENSAHAP00000007799
annotation not available
    
  0.514
MST1R
Macrophage stimulating 1 receptor.
    
  0.514
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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