STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KRT18Keratin 18. (423 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.755
ENSAHAP00000007298
annotation not available
   
 0.694
ENSAHAP00000005925
annotation not available
    
 0.648
ENSAHAP00000005928
annotation not available
    
 0.648
ENSAHAP00000005962
annotation not available
    
 0.648
WDR82
WD repeat domain 82.
    
 0.642
CPSF1
Cleavage and polyadenylation specific factor 1.
    
  0.636
ENSAHAP00000027239
annotation not available
    
 0.635
CPSF3
Cleavage and polyadenylation specific factor 3.
    
  0.615
SYMPK
Symplekin.
    
  0.615
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.