STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CZIBCXXC motif containing zinc binding protein. (160 aa)    
Predicted Functional Partners:
ENSAHAP00000012605
annotation not available
   
   0.738
GFM2
G elongation factor mitochondrial 2.
    
   0.738
UPF2
UPF2 regulator of nonsense mediated mRNA decay.
     
  0.715
PYM1
PYM homolog 1, exon junction complex associated factor.
     
  0.671
PRADC1
Protease associated domain containing 1.
      
 0.593
ENSAHAP00000003238
annotation not available
      
 0.591
ENSAHAP00000012984
annotation not available
   
  
 0.589
PHC1
Polyhomeotic homolog 1.
      
 0.579
DNAJC17
DnaJ heat shock protein family (Hsp40) member C17.
   
   0.488
MAGOH
Mago homolog, exon junction complex subunit.
 
 
 
  0.484
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.