STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MXRA8Matrix remodeling associated 8. (430 aa)    
Predicted Functional Partners:
LDLRAD3
Low density lipoprotein receptor class A domain containing 3.
      
 0.547
ENSAHAP00000026473
annotation not available
     
 0.525
ENSAHAP00000026475
annotation not available
     
 0.525
ENSAHAP00000007159
annotation not available
      
 0.493
MEAK7
MTOR associated protein, eak-7 homolog.
      
 0.478
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
     
 0.454
SAMD7
Sterile alpha motif domain containing 7.
     
 0.434
PTPRU
Protein tyrosine phosphatase receptor type U.
      
 0.432
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.