STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BICD1BICD cargo adaptor 1. (862 aa)    
Predicted Functional Partners:
DCTN2
Dynactin subunit 2.
    
 0.911
ENSAHAP00000009115
annotation not available
    
 0.905
ENSAHAP00000007609
annotation not available
 
      0.899
DYNC1LI1
Dynein cytoplasmic 1 light intermediate chain 1.
    
 0.896
DYNC1H1
Dynein cytoplasmic 1 heavy chain 1.
    
 0.867
DYNC1LI2
Dynein cytoplasmic 1 light intermediate chain 2.
    
 0.842
RAB6B
RAB6B, member RAS oncogene family.
    
 0.812
RAB6A
RAB6A, member RAS oncogene family.
    
 0.812
ENSAHAP00000011638
annotation not available
    
 0.812
DYNC1I1
Dynein cytoplasmic 1 intermediate chain 1.
    
  0.801
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.