STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITFG1Integrin alpha FG-GAP repeat containing 1. (599 aa)    
Predicted Functional Partners:
NME4
NME/NM23 nucleoside diphosphate kinase 4.
    
 
 0.692
PHKB
Phosphorylase kinase regulatory subunit beta.
   
  
 0.682
MRPS5
Mitochondrial ribosomal protein S5.
    
 
 0.669
SOGA1
Suppressor of glucose, autophagy associated 1.
      
 0.639
MRPL19
Mitochondrial ribosomal protein L19.
      
 0.636
MRPL47
Mitochondrial ribosomal protein L47.
      
 0.631
GPR22
G protein-coupled receptor 22.
      
 0.628
POMP
Proteasome maturation protein.
      
 0.609
ANAPC2
Anaphase promoting complex subunit 2.
      
 0.609
SLC24A4
Solute carrier family 24 member 4.
      
 0.602
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.