STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SH3RF2SH3 domain containing ring finger 2. (761 aa)    
Predicted Functional Partners:
ANKRD9
Ankyrin repeat domain 9.
    
 0.717
RHPN1
Rhophilin Rho GTPase binding protein 1.
   
 
 0.705
KCMF1
Potassium channel modulatory factor 1.
      
 0.678
NRP2
Neuropilin 2.
      
 0.678
TRAPPC12
Trafficking protein particle complex 12.
      
 0.662
ENSAHAP00000002022
annotation not available
    
 0.614
TENM4
Teneurin transmembrane protein 4.
    
 
 0.603
ENSAHAP00000017312
annotation not available
      
 0.593
SHANK3
SH3 and multiple ankyrin repeat domains 3.
    
 0.561
SP4
Sp4 transcription factor.
    
 0.537
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.