STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C16orf87Chromosome 16 open reading frame 87. (116 aa)    
Predicted Functional Partners:
ARID5B
AT-rich interaction domain 5B.
    
 
 0.663
MIER3
MIER family member 3.
    
   0.631
MIER1
MIER1 transcriptional regulator.
    
   0.572
ANAPC4
Anaphase promoting complex subunit 4.
    
   0.566
ANAPC2
Anaphase promoting complex subunit 2.
    
   0.565
FZR1
Fizzy and cell division cycle 20 related 1.
    
   0.565
ANAPC7
Anaphase promoting complex subunit 7.
    
   0.502
ANAPC16
Anaphase promoting complex subunit 16.
    
   0.465
ANAPC1
Anaphase promoting complex subunit 1.
    
   0.445
ANAPC5
Anaphase promoting complex subunit 5.
    
   0.443
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.