Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000008335annotation not available (272 aa)    
Predicted Functional Partners:
CASQ1
Calsequestrin 1.
   
 0.988
CASQ2
Calsequestrin 2.
   
 0.988
ASPH
Aspartate beta-hydroxylase.
   
 0.987
RYR2
Ryanodine receptor 2.
   
 0.971
ENSAHAP00000025387
annotation not available
   
 0.971
ENSAHAP00000025392
annotation not available
   
 0.971
EMC2
ER membrane protein complex subunit 2.
    
   0.897
EMC3
ER membrane protein complex subunit 3.
    
   0.863
EMC8
ER membrane protein complex subunit 8.
    
   0.855
BAG5
BCL2 associated athanogene 5.
    
  0.846
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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