STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CAPGCapping actin protein, gelsolin like. (348 aa)    
Predicted Functional Partners:
WASL
WASP like actin nucleation promoting factor.
    
 
 0.867
PIP5K1B
Phosphatidylinositol-4-phosphate 5-kinase type 1 beta.
     
 0.841
SCIN
Scinderin.
     
  0.840
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
     
  0.840
ENSAHAP00000017363
annotation not available
    
 0.837
COG3
Component of oligomeric golgi complex 3.
    
 0.834
CASP3
Caspase 3.
    
 0.807
PIP5K1A
Phosphatidylinositol-4-phosphate 5-kinase type 1 alpha.
     
  0.801
PIP4K2A
Phosphatidylinositol-5-phosphate 4-kinase type 2 alpha.
     
  0.801
PIP5K1C
Phosphatidylinositol-4-phosphate 5-kinase type 1 gamma.
     
  0.801
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.