STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B. (285 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.984
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
  0.973
ENSAHAP00000026107
annotation not available
   
 0.972
YBX1
Y-box binding protein 1.
   
 0.958
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
   
   0.927
ENSAHAP00000008078
annotation not available
   
 0.920
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 0.920
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.920
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.920
ELAVL1
ELAV like RNA binding protein 1.
  
 0.910
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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