STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000008845annotation not available (224 aa)    
Predicted Functional Partners:
ENSAHAP00000010521
annotation not available
   
  
 0.722
IFIH1
Interferon induced with helicase C domain 1.
   
  
 0.706
ENSAHAP00000000090
annotation not available
   
  
 0.677
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.674
ENSAHAP00000005038
annotation not available
     
 0.663
ENSAHAP00000008983
annotation not available
   
  
 0.653
SDHB
Succinate dehydrogenase complex iron sulfur subunit B.
    
   0.639
DHX58
DExH-box helicase 58.
   
  
 0.607
RSAD2
Radical S-adenosyl methionine domain containing 2.
   
  
 0.598
ANKRD13C
Ankyrin repeat domain 13C.
      
 0.579
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.