STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SH3BP4SH3 domain binding protein 4. (964 aa)    
Predicted Functional Partners:
RRAGB
Ras related GTP binding B.
     
 0.666
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
     
 0.604
LAMTOR1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
     
 0.601
RRAGC
Ras related GTP binding C.
     
 0.592
LAMTOR3
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 3.
     
 0.591
SLC38A9
Solute carrier family 38 member 9.
     
 0.590
LAMTOR5
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5.
     
 0.589
TMEM82
Transmembrane protein 82.
      
 0.542
PAXIP1
PAX interacting protein 1.
      
 0.529
ENSAHAP00000017023
annotation not available
      
 0.521
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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