STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF19BRing finger protein 19B. (640 aa)    
Predicted Functional Partners:
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.784
ENSAHAP00000026137
annotation not available
    
 0.782
ENSAHAP00000006378
annotation not available
   
 0.763
RNF216
Ring finger protein 216.
    
 0.752
ENSAHAP00000012792
annotation not available
   
 0.741
BIRC6
Baculoviral IAP repeat containing 6.
    
 0.731
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.695
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.659
ARIH2
Ariadne RBR E3 ubiquitin protein ligase 2.
    
0.652
RNF7
Ring finger protein 7.
    
 0.625
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.