STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CEBPDCCAAT enhancer binding protein delta. (132 aa)    
Predicted Functional Partners:
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.843
ENSAHAP00000012119
annotation not available
   
 0.808
COX4I1
Cytochrome c oxidase subunit 4I1.
   
 0.808
ENSAHAP00000022539
annotation not available
   
 0.808
ENSAHAP00000024400
annotation not available
   
 0.779
COX7C
Cytochrome c oxidase subunit 7C.
   
 0.770
CEBPB
CCAAT enhancer binding protein beta.
   
0.760
ATF5
Activating transcription factor 5.
   
 0.746
ATF4
Activating transcription factor 4.
   
 0.746
AICDA
Activation induced cytidine deaminase.
   
 0.729
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.