STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAHAP00000014260annotation not available (594 aa)    
Predicted Functional Partners:
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
   
0.844
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
   
0.844
OGFOD2
2-oxoglutarate and iron dependent oxygenase domain containing 2.
   
 0.635
ENSAHAP00000009107
annotation not available
    
 0.618
COL6A2
Collagen type VI alpha 2 chain.
   
 0.574
ENSAHAP00000023997
annotation not available
   
 0.574
COL8A1
Collagen type VIII alpha 1 chain.
    
  0.562
ENSAHAP00000002111
annotation not available
    
  0.533
ENSAHAP00000026538
annotation not available
    
  0.533
ENSAHAP00000021120
annotation not available
    
  0.521
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.