STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATOH1Atonal bHLH transcription factor 1. (235 aa)    
Predicted Functional Partners:
TCF3
Transcription factor 3.
    
 
 0.729
TCF12
Transcription factor 12.
    
 
 0.729
TCF4
Transcription factor 4.
    
 
 0.729
BHLHE23
Basic helix-loop-helix family member e23.
   
 
 0.480
OLIG3
Oligodendrocyte transcription factor 3.
   
 
0.480
PAX6
Paired box 6.
      
 0.478
HOXB7
Homeobox B7.
    
 
 0.449
HOXB1
Homeobox B1.
    
 
 0.434
ENSAHAP00000024917
annotation not available
   
  
 0.426
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.