STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BTF3L4Basic transcription factor 3 like 4. (162 aa)    
Predicted Functional Partners:
NACA
Nascent polypeptide associated complex subunit alpha.
   
 0.986
ENSAHAP00000026574
annotation not available
   
 0.980
RPL6
Ribosomal protein L6.
   
 0.949
ENSAHAP00000028030
annotation not available
   
  0.946
RPL30
Ribosomal protein L30.
   
  0.931
RPL8
Ribosomal protein L8.
   
  0.925
RPL19
Ribosomal protein L19.
   
  0.918
RPL21
Ribosomal protein L21.
   
   0.912
ENSAHAP00000016140
annotation not available
   
  0.900
RPL24
Ribosomal protein L24.
   
  0.899
Your Current Organism:
Apteryx haastii
NCBI taxonomy Id: 8823
Other names: A. haastii, Great spotted kiwi
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